Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC180Q9P1Z9 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 AC100850.1-201ENST00000506768 649 ntBASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 AL645937.2-201ENST00000396808 931 ntBASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 SLC16A6P1-201ENST00000413214 1059 ntBASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 BNIP3P13-201ENST00000599968 566 ntBASIC31.86■■■□□ 2.69
CCDC180Q9P1Z9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 AL603764.1-201ENST00000636452 321 ntBASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC180Q9P1Z9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 MIR648-201ENST00000385046 94 ntBASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 AL023803.2-201ENST00000620080 638 ntBASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 AL645728.2-202ENST00000641679 227 ntBASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC180Q9P1Z9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC180Q9P1Z9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 AC011742.3-201ENST00000439053 820 ntBASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC31.82■■■□□ 2.69
CCDC180Q9P1Z9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 MIR4750-201ENST00000584564 56 ntBASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC180Q9P1Z9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 ME2P1-201ENST00000426028 1970 ntBASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC180Q9P1Z9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms