Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC245100.5-201ENST00000452108 331 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC026150.2-201ENST00000564693 1156 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MIR4321-201ENST00000592276 80 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC018529.1-201ENST00000613063 361 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 FOXO1B-201ENST00000504678 1527 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 AC006449.6-201ENST00000612330 2296 ntBASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 AC005052.1-201ENST00000625181 2492 ntBASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PARPBPQ9NWS1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 DOC2GP-204ENST00000639052 2548 ntBASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PARPBPQ9NWS1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms