Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KRT18P67-201ENST00000432816 1264 ntBASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AL009183.1-201ENST00000603760 355 ntBASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AL078644.1-201ENST00000609881 752 ntBASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 AC117500.6-201ENST00000624871 588 ntBASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.1□□□□□ -0.63
CDC42SE2Q9NRR3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AL589702.1-201ENST00000641229 1509 ntBASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC090616.6-203ENST00000579186 1945 ntBASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AL161772.1-201ENST00000610494 4412 ntBASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC108751.1-201ENST00000490852 363 ntBASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CDC42SE2Q9NRR3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
CDC42SE2Q9NRR3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 AC073439.1-201ENST00000624121 1774 ntBASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CDC42SE2Q9NRR3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms