Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 AP001282.1-201ENST00000531301 1499 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 AL450487.1-201ENST00000426799 995 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 RNA5SP415-201ENST00000517246 115 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 MIR4321-201ENST00000592276 80 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 AL049840.3-201ENST00000602669 611 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 AL161645.1-201ENST00000622716 1255 ntBASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC136621.1-201ENST00000624017 2304 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC020658.6-201ENST00000623564 1870 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC002347.1-201ENST00000569543 541 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 PCDHA3-202ENST00000532566 4594 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 PMS2P7-201ENST00000506558 1336 ntBASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR2J3Q9H1A7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 AL589702.1-201ENST00000641229 1509 ntBASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR2J3Q9H1A7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms