Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 AC114501.2-201ENST00000439631 535 ntBASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 LINC02447-202ENST00000501888 2146 ntBASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 WASH4P-201ENST00000564273 1246 ntBASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
RPAP1Q9BWH6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC007541.1-201ENST00000570282 1469 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 SPDYE17-201ENST00000412399 783 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AL359881.2-201ENST00000602973 570 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC138969.3-201ENST00000546612 1459 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC138932.2-201ENST00000548268 1459 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 AC126755.4-201ENST00000549796 1459 ntBASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
RPAP1Q9BWH6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AC103702.1-201ENST00000548801 2630 ntBASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 KRT8P12-202ENST00000472924 1397 ntBASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.4■□□□□ 0.7
RPAP1Q9BWH6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RPAP1Q9BWH6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.39■□□□□ 0.7
RPAP1Q9BWH6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPAP1Q9BWH6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.39■□□□□ 0.69
RPAP1Q9BWH6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms