Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 HMGA1P7-201ENST00000406908 502 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.25□□□□□ -0.45
VGLL1Q99990 FAM185BP-201ENST00000443595 716 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 AC108073.2-201ENST00000464002 357 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.25□□□□□ -0.45
VGLL1Q99990 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 AC105339.3-201ENST00000560043 636 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
VGLL1Q99990 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 AL031055.1-201ENST00000606362 631 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 AC021097.1-201ENST00000607902 574 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 AC005593.1-201ENST00000624894 515 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 AC008677.1-201ENST00000519230 1561 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.25□□□□□ -0.45
VGLL1Q99990 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
VGLL1Q99990 AC136621.1-201ENST00000624017 2304 ntBASIC12.25□□□□□ -0.45
VGLL1Q99990 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VGLL1Q99990 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 AL009178.2-201ENST00000597278 2719 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
VGLL1Q99990 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 HNRNPDP1-201ENST00000439535 754 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.24□□□□□ -0.45
VGLL1Q99990 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.24□□□□□ -0.45
VGLL1Q99990 AC012640.2-201ENST00000561606 901 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.24□□□□□ -0.45
VGLL1Q99990 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 SSR4P1-203ENST00000599569 2260 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 IFNL4P1-201ENST00000607083 540 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 AC012313.10-201ENST00000623509 926 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
VGLL1Q99990 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VGLL1Q99990 CICP4-201ENST00000447359 2812 ntBASIC12.24□□□□□ -0.45
VGLL1Q99990 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
VGLL1Q99990 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.23□□□□□ -0.45
VGLL1Q99990 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms