Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.81■□□□□ 0.92
ABCA3Q99758 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 AC244157.2-201ENST00000616239 1006 ntBASIC20.81■□□□□ 0.92
ABCA3Q99758 AC018892.3-201ENST00000623986 2499 ntBASIC20.81■□□□□ 0.92
ABCA3Q99758 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ABCA3Q99758 AC234782.1-201ENST00000451950 919 ntBASIC20.81■□□□□ 0.92
ABCA3Q99758 RN7SL774P-201ENST00000577467 290 ntBASIC20.81■□□□□ 0.92
ABCA3Q99758 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ABCA3Q99758 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ABCA3Q99758 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 TUBBP5-203ENST00000508529 1334 ntBASIC20.8■□□□□ 0.92
ABCA3Q99758 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 CEP164P1-201ENST00000455142 418 ntBASIC20.8■□□□□ 0.92
ABCA3Q99758 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.8■□□□□ 0.92
ABCA3Q99758 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 OR10B1P-201ENST00000601666 907 ntBASIC20.8■□□□□ 0.92
ABCA3Q99758 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 PRSS30P-206ENST00000641773 873 ntBASIC20.8■□□□□ 0.92
ABCA3Q99758 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.8■□□□□ 0.92
ABCA3Q99758 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ABCA3Q99758 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ABCA3Q99758 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.79■□□□□ 0.92
ABCA3Q99758 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.79■□□□□ 0.92
ABCA3Q99758 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ABCA3Q99758 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 LRRC59-203ENST00000576448 1531 ntBASIC20.79■□□□□ 0.92
ABCA3Q99758 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ABCA3Q99758 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 AL596276.2-201ENST00000447525 331 ntBASIC20.79■□□□□ 0.92
ABCA3Q99758 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.79■□□□□ 0.92
ABCA3Q99758 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.79■□□□□ 0.92
ABCA3Q99758 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.79■□□□□ 0.92
ABCA3Q99758 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ABCA3Q99758 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ABCA3Q99758 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ABCA3Q99758 AC005052.1-201ENST00000625181 2492 ntBASIC20.79■□□□□ 0.92
ABCA3Q99758 AL139094.1-201ENST00000405549 1188 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 AL133466.1-201ENST00000447582 150 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms