Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.7□□□□□ -0.7
LITAFQ99732 CICP20-201ENST00000443330 2801 ntBASIC10.7□□□□□ -0.7
LITAFQ99732 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.7□□□□□ -0.7
LITAFQ99732 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LITAFQ99732 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.7□□□□□ -0.7
LITAFQ99732 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LITAFQ99732 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LITAFQ99732 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LITAFQ99732 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 SOD2-201ENST00000337404 991 ntTSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC10.69□□□□□ -0.7
LITAFQ99732 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 AC107918.2-201ENST00000530817 355 ntBASIC10.69□□□□□ -0.7
LITAFQ99732 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10.69□□□□□ -0.7
LITAFQ99732 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 AC127383.1-201ENST00000444697 1800 ntBASIC10.69□□□□□ -0.7
LITAFQ99732 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
LITAFQ99732 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LITAFQ99732 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LITAFQ99732 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LITAFQ99732 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 AP001282.1-201ENST00000531301 1499 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 CICP17-201ENST00000418553 2377 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 AC092135.3-201ENST00000624151 1846 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.68□□□□□ -0.7
LITAFQ99732 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 MIR718-201ENST00000390190 70 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
LITAFQ99732 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 HCG4-201ENST00000418983 998 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.68□□□□□ -0.7
LITAFQ99732 YBX1P2-201ENST00000489612 999 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 SLC25A6P2-201ENST00000497974 877 ntBASIC10.68□□□□□ -0.7
LITAFQ99732 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC10.68□□□□□ -0.7
LITAFQ99732 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LITAFQ99732 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.68□□□□□ -0.7
LITAFQ99732 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms