Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 ACTBP8-201ENST00000403258 1108 ntBASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 CLUHP6-201ENST00000580789 941 ntBASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 BAATP1-201ENST00000412284 1225 ntBASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP2Q96SN8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AC099336.1-201ENST00000417053 1171 ntBASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 RPL7P3-201ENST00000441388 714 ntBASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 CTBP2P5-201ENST00000454986 1264 ntBASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AL022328.1-201ENST00000610050 478 ntBASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AL118508.1-201ENST00000613502 2345 ntBASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP2Q96SN8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP2Q96SN8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms