Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19■□□□□ 0.63
NEK1Q96PY6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19■□□□□ 0.63
NEK1Q96PY6 BANF1P1-201ENST00000553684 263 ntBASIC19■□□□□ 0.63
NEK1Q96PY6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19■□□□□ 0.63
NEK1Q96PY6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19■□□□□ 0.63
NEK1Q96PY6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19■□□□□ 0.63
NEK1Q96PY6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NEK1Q96PY6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19■□□□□ 0.63
NEK1Q96PY6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19■□□□□ 0.63
NEK1Q96PY6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19■□□□□ 0.63
NEK1Q96PY6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 AL353705.2-201ENST00000428243 662 ntBASIC18.99■□□□□ 0.63
NEK1Q96PY6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 SNHG9-202ENST00000564014 471 ntBASIC18.99■□□□□ 0.63
NEK1Q96PY6 AC105021.1-202ENST00000570572 669 ntBASIC18.99■□□□□ 0.63
NEK1Q96PY6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 AL596442.2-201ENST00000610240 980 ntBASIC18.99■□□□□ 0.63
NEK1Q96PY6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEK1Q96PY6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.99■□□□□ 0.63
NEK1Q96PY6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 DNAJB3-202ENST00000449667 1266 ntBASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC027612.4-201ENST00000605371 583 ntBASIC18.98■□□□□ 0.63
NEK1Q96PY6 AC003101.2-201ENST00000612557 442 ntBASIC18.98■□□□□ 0.63
NEK1Q96PY6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 KRT8P37-201ENST00000451609 1420 ntBASIC18.98■□□□□ 0.63
NEK1Q96PY6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NEK1Q96PY6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEK1Q96PY6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms