Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 DUX4L27-201ENST00000554796 1261 ntBASIC13.33□□□□□ -0.28
GAFA1Q96PS6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAFA1Q96PS6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AC018892.3-201ENST00000623986 2499 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 MIR943-201ENST00000401286 94 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AZGP1P1-201ENST00000411909 902 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 RFPL4AP1-201ENST00000530883 850 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AL450472.2-201ENST00000603663 1156 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AL158211.3-201ENST00000607385 239 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 TEX28P1-201ENST00000613479 1221 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 TEX28P2-201ENST00000617764 1221 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AC093512.1-201ENST00000617969 520 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 AP005117.1-202ENST00000581724 1908 ntBASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAFA1Q96PS6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 AC092580.3-201ENST00000430932 139 ntBASIC13.31□□□□□ -0.28
GAFA1Q96PS6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 HIST3H2BA-201ENST00000436555 524 ntBASIC13.31□□□□□ -0.28
GAFA1Q96PS6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 AC027369.6-201ENST00000525520 931 ntBASIC13.31□□□□□ -0.28
GAFA1Q96PS6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.31□□□□□ -0.28
GAFA1Q96PS6 AC008741.2-201ENST00000612792 3115 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms