Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 SDHAP3-202ENST00000515467 728 ntBASIC18.76■□□□□ 0.59
TRIM47Q96LD4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AC008735.3-201ENST00000596646 500 ntBASIC18.76■□□□□ 0.59
TRIM47Q96LD4 WFDC1-204ENST00000613603 549 ntBASIC18.76■□□□□ 0.59
TRIM47Q96LD4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.76■□□□□ 0.59
TRIM47Q96LD4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.75■□□□□ 0.59
TRIM47Q96LD4 AC093726.1-201ENST00000608064 963 ntBASIC18.75■□□□□ 0.59
TRIM47Q96LD4 KRT8P12-202ENST00000472924 1397 ntBASIC18.75■□□□□ 0.59
TRIM47Q96LD4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 DOC2GP-204ENST00000639052 2548 ntBASIC18.75■□□□□ 0.59
TRIM47Q96LD4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM47Q96LD4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AL671710.1-201ENST00000610245 2349 ntBASIC18.74■□□□□ 0.59
TRIM47Q96LD4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AL662844.4-201ENST00000606367 2838 ntBASIC18.74■□□□□ 0.59
TRIM47Q96LD4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 GPR182-203ENST00000622922 591 ntBASIC18.74■□□□□ 0.59
TRIM47Q96LD4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM47Q96LD4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms