Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX27Q96L92 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX27Q96L92 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
SNX27Q96L92 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX27Q96L92 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 AC007541.1-201ENST00000570282 1469 ntBASIC17.25■□□□□ 0.35
SNX27Q96L92 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNX27Q96L92 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX27Q96L92 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 AC074338.1-201ENST00000416825 156 ntBASIC17.25■□□□□ 0.35
SNX27Q96L92 DFFBP1-201ENST00000433250 979 ntBASIC17.25■□□□□ 0.35
SNX27Q96L92 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX27Q96L92 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.25■□□□□ 0.35
SNX27Q96L92 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 KRT8P44-201ENST00000441609 1350 ntBASIC17.25■□□□□ 0.35
SNX27Q96L92 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX27Q96L92 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNX27Q96L92 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX27Q96L92 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNX27Q96L92 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNX27Q96L92 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 MIR658-201ENST00000385210 100 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 TARDBPP1-201ENST00000442013 1203 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 PHKG1P2-201ENST00000457537 863 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX27Q96L92 AC093004.1-201ENST00000508850 424 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.24■□□□□ 0.35
SNX27Q96L92 API5-211ENST00000534695 560 ntTSL 5 BASIC17.24■□□□□ 0.35
SNX27Q96L92 HNRNPUP1-201ENST00000554987 333 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX27Q96L92 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.24■□□□□ 0.35
SNX27Q96L92 AL450472.2-201ENST00000603663 1156 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 LINC01115-203ENST00000606068 577 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 AL033527.4-201ENST00000641026 673 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 PCDH8P1-201ENST00000428983 2773 ntBASIC17.24■□□□□ 0.35
SNX27Q96L92 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
SNX27Q96L92 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNX27Q96L92 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms