Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN23Q96B33 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN23Q96B33 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN23Q96B33 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN23Q96B33 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN23Q96B33 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN23Q96B33 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN23Q96B33 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN23Q96B33 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 MIR1202-201ENST00000408529 83 ntBASIC15.82■□□□□ 0.12
CLDN23Q96B33 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 HIST2H2BC-201ENST00000498492 580 ntBASIC15.82■□□□□ 0.12
CLDN23Q96B33 GAPDHP40-201ENST00000505218 1006 ntBASIC15.82■□□□□ 0.12
CLDN23Q96B33 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN23Q96B33 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN23Q96B33 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 NUS1P3-201ENST00000423502 862 ntBASIC15.81■□□□□ 0.12
CLDN23Q96B33 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 AC007613.1-201ENST00000572811 2597 ntBASIC15.81■□□□□ 0.12
CLDN23Q96B33 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 AL096828.3-201ENST00000615354 462 ntBASIC15.81■□□□□ 0.12
CLDN23Q96B33 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN23Q96B33 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN23Q96B33 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 PCDHB18P-201ENST00000524813 2368 ntBASIC15.8■□□□□ 0.12
CLDN23Q96B33 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN23Q96B33 EIF4HP1-201ENST00000453115 687 ntBASIC15.8■□□□□ 0.12
CLDN23Q96B33 RN7SL769P-201ENST00000469386 295 ntBASIC15.8■□□□□ 0.12
CLDN23Q96B33 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN23Q96B33 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms