Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS3Q969F9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS3Q969F9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HPS3Q969F9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HPS3Q969F9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS3Q969F9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS3Q969F9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.79■□□□□ 0.44
HPS3Q969F9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS3Q969F9 AC092127.1-201ENST00000567093 3455 ntBASIC17.79■□□□□ 0.44
HPS3Q969F9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS3Q969F9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HPS3Q969F9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS3Q969F9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS3Q969F9 CYP4F24P-201ENST00000586049 1580 ntBASIC17.79■□□□□ 0.44
HPS3Q969F9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS3Q969F9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.78■□□□□ 0.44
HPS3Q969F9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 AC023141.5-201ENST00000458585 616 ntBASIC17.78■□□□□ 0.44
HPS3Q969F9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS3Q969F9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS3Q969F9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 AC009093.7-201ENST00000623853 1223 ntBASIC17.78■□□□□ 0.44
HPS3Q969F9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
HPS3Q969F9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HPS3Q969F9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS3Q969F9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPS3Q969F9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 AC009090.5-201ENST00000624886 2285 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HPS3Q969F9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HPS3Q969F9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 AL139400.1-201ENST00000366220 510 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 MIR1233-2-201ENST00000408138 82 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 MIR1233-1-201ENST00000408722 82 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 AC254562.1-201ENST00000417586 456 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS3Q969F9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.77■□□□□ 0.44
HPS3Q969F9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS3Q969F9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.77■□□□□ 0.44
HPS3Q969F9 GPALPP1-207ENST00000611650 899 ntBASIC17.77■□□□□ 0.44
HPS3Q969F9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPS3Q969F9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HPS3Q969F9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.77■□□□□ 0.44
HPS3Q969F9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
HPS3Q969F9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HPS3Q969F9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.77■□□□□ 0.43
HPS3Q969F9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HPS3Q969F9 AC073347.1-201ENST00000421633 2643 ntBASIC17.77■□□□□ 0.43
HPS3Q969F9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HPS3Q969F9 REXO1L1P-202ENST00000608646 1974 ntBASIC17.77■□□□□ 0.43
HPS3Q969F9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HPS3Q969F9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HPS3Q969F9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.76■□□□□ 0.43
HPS3Q969F9 AP002414.2-201ENST00000591780 3365 ntBASIC17.76■□□□□ 0.43
HPS3Q969F9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.76■□□□□ 0.43
HPS3Q969F9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms