Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AL355306.1-201ENST00000415580 579 ntBASIC16.54■□□□□ 0.24
SCG3Q8WXD2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AC005237.2-201ENST00000434368 219 ntBASIC16.54■□□□□ 0.24
SCG3Q8WXD2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AC023141.5-201ENST00000458585 616 ntBASIC16.54■□□□□ 0.24
SCG3Q8WXD2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
SCG3Q8WXD2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.53■□□□□ 0.24
SCG3Q8WXD2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 RNU1-129P-201ENST00000384064 167 ntBASIC16.53■□□□□ 0.24
SCG3Q8WXD2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 U1.21-201ENST00000580816 167 ntBASIC16.53■□□□□ 0.24
SCG3Q8WXD2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.53■□□□□ 0.24
SCG3Q8WXD2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 TFAMP1-201ENST00000412727 736 ntBASIC16.52■□□□□ 0.24
SCG3Q8WXD2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 HLA-J-203ENST00000494367 1087 ntBASIC16.52■□□□□ 0.24
SCG3Q8WXD2 AC109635.5-201ENST00000533593 962 ntBASIC16.52■□□□□ 0.24
SCG3Q8WXD2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 RARRES2P8-201ENST00000566335 367 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms