Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AC079776.2-201ENST00000641154 1609 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AC245100.5-201ENST00000452108 331 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 TSPY15P-201ENST00000457163 923 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AC087163.2-201ENST00000457299 853 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 YBX1P2-201ENST00000489612 999 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 AC006504.5-208ENST00000588784 2401 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.64□□□□□ -0.39
MBD3L1Q8WWY6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 WASH6P-202ENST00000359512 1437 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 ZBED1P1-201ENST00000502364 1930 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 SPDYE13P-201ENST00000445314 798 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PRYP5-201ENST00000451909 266 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 HOMER2P1-201ENST00000455653 964 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 AC091607.1-201ENST00000490318 1060 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 AC008550.1-201ENST00000511500 884 ntBASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MBD3L1Q8WWY6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 AC005252.3-201ENST00000623855 2258 ntBASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MBD3L1Q8WWY6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms