Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AC061975.2-201ENST00000581722 295 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AL138828.2-201ENST00000615812 383 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AC092171.3-201ENST00000610122 2651 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 MST1L-201ENST00000442552 2185 ntBASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM48Q8IWZ4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 MIR3197-201ENST00000582241 73 ntBASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 AC100757.3-201ENST00000622361 1406 ntBASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM48Q8IWZ4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 MIR4745-201ENST00000577608 62 ntBASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM48Q8IWZ4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms