Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AC009533.2-201ENST00000543664 586 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 HOMER2P1-201ENST00000455653 964 ntBASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD2Q8IV50 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
LYSMD2Q8IV50 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LYSMD2Q8IV50 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TCAF1P1-201ENST00000414990 2232 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 TSPY22P-201ENST00000427496 604 ntBASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.14□□□□□ -0.15
LYSMD2Q8IV50 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms