Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
CCDC71Q8IV32 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC71Q8IV32 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC136621.1-201ENST00000624017 2304 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC005237.2-201ENST00000434368 219 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SPCS2P1-201ENST00000561636 679 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC093520.2-201ENST00000561830 333 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 MPDU1-223ENST00000582151 728 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC026120.1-201ENST00000611536 926 ntBASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC71Q8IV32 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 LINC01144-201ENST00000626198 1710 ntBASIC15.09■□□□□ 0.01
CCDC71Q8IV32 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC71Q8IV32 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms