Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SPDYE11-202ENST00000450699 704 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SPDYE9P-201ENST00000570642 692 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SPDYE10P-202ENST00000612005 668 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SPDYE8P-202ENST00000612377 668 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AC008267.7-201ENST00000624570 1194 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AC134407.2-201ENST00000625089 1978 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 FOXO1B-201ENST00000504678 1527 ntBASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFX6Q8HWS3 AP001282.1-201ENST00000531301 1499 ntBASIC16.73■□□□□ 0.27
RFX6Q8HWS3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 RN7SL589P-201ENST00000481268 310 ntBASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC024267.1-201ENST00000582320 895 ntBASIC16.73■□□□□ 0.27
RFX6Q8HWS3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.73■□□□□ 0.27
RFX6Q8HWS3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 MIR574-201ENST00000385209 96 ntBASIC16.72■□□□□ 0.27
RFX6Q8HWS3 YBX2P1-201ENST00000394192 760 ntBASIC16.72■□□□□ 0.27
RFX6Q8HWS3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.72■□□□□ 0.27
RFX6Q8HWS3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms