Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC109635.5-201ENST00000533593 962 ntBASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AL691432.3-201ENST00000621860 400 ntBASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.72□□□□□ -0.05
SMARCD3Q6STE5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 MYO15B-237ENST00000642007 4893 ntBASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AL031284.1-201ENST00000419297 478 ntBASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AL009183.1-201ENST00000603760 355 ntBASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 AL365330.1-201ENST00000607459 531 ntBASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 MIR7706-201ENST00000613747 67 ntBASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMARCD3Q6STE5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMARCD3Q6STE5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 AC004870.1-201ENST00000315132 882 ntBASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 AC009947.1-201ENST00000444350 727 ntBASIC14.7□□□□□ -0.06
SMARCD3Q6STE5 AC245100.5-201ENST00000452108 331 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms