Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 AP001094.4-201ENST00000579008 2176 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 FAM197Y7-201ENST00000432892 766 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 AC015910.1-201ENST00000579400 975 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 AP005019.2-201ENST00000615104 511 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 AL645608.8-201ENST00000606034 2086 ntBASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNKSR3Q6P9H4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC092506.1-202ENST00000401022 528 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CALR4P-201ENST00000431943 946 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC104306.2-201ENST00000451877 341 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 KRT18P25-201ENST00000508931 1278 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC078819.1-201ENST00000547454 765 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC012085.1-201ENST00000548270 765 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms