Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP001282.1-201ENST00000531301 1499 ntBASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 AC023310.1-201ENST00000554836 735 ntBASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 DUX4L45-201ENST00000566406 1057 ntBASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 AL450472.2-201ENST00000603663 1156 ntBASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD4Q5XG99 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 KRT18P43-201ENST00000469825 1281 ntBASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 REXO1L8P-201ENST00000604378 1897 ntBASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD4Q5XG99 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AC136604.1-201ENST00000418535 575 ntBASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AC006033.1-201ENST00000440505 426 ntBASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 KRT8P13-201ENST00000463294 1010 ntBASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 AC000095.1-201ENST00000603208 874 ntBASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LYSMD4Q5XG99 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms