Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 SPDYE7P-202ENST00000420373 878 ntBASIC16.65■□□□□ 0.26
RAB6CQ53S08 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AL079307.3-201ENST00000556114 283 ntBASIC16.65■□□□□ 0.26
RAB6CQ53S08 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB6CQ53S08 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB6CQ53S08 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
RAB6CQ53S08 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
RAB6CQ53S08 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 AC092580.3-201ENST00000430932 139 ntBASIC16.64■□□□□ 0.25
RAB6CQ53S08 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 AL138828.2-201ENST00000615812 383 ntBASIC16.64■□□□□ 0.25
RAB6CQ53S08 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB6CQ53S08 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB6CQ53S08 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB6CQ53S08 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 SPDYE17-201ENST00000412399 783 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 TREML5P-201ENST00000421694 576 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 HNRNPUP1-201ENST00000554987 333 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 AC025678.2-201ENST00000562061 970 ntBASIC16.63■□□□□ 0.25
RAB6CQ53S08 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB6CQ53S08 AC097359.3-201ENST00000603982 1210 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms