Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM71Q2Q1W2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 C1QBPP1-201ENST00000400117 770 ntBASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 RPL13AP25-201ENST00000484130 612 ntBASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 FAM8A2P-201ENST00000528813 1142 ntBASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 AL450472.2-201ENST00000603663 1156 ntBASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM71Q2Q1W2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 HAUS4P1-201ENST00000406739 1145 ntBASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 BAATP1-201ENST00000412284 1225 ntBASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AL355994.2-201ENST00000447882 704 ntBASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AC007551.1-201ENST00000457394 519 ntBASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 GPR182-203ENST00000622922 591 ntBASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM71Q2Q1W2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 ME2P1-201ENST00000426028 1970 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 AC012441.1-201ENST00000446669 685 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 AC093433.1-201ENST00000458048 571 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 FTH1P14-201ENST00000482930 551 ntBASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM71Q2Q1W2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms