Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 ACTBP8-201ENST00000403258 1108 ntBASIC19.81■□□□□ 0.76
R3HDM1Q15032 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 ISCA2P1-201ENST00000425548 448 ntBASIC19.81■□□□□ 0.76
R3HDM1Q15032 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 BX539320.1-201ENST00000623759 877 ntBASIC19.81■□□□□ 0.76
R3HDM1Q15032 AC004923.1-202ENST00000642106 209 ntBASIC19.81■□□□□ 0.76
R3HDM1Q15032 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HDM1Q15032 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM1Q15032 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 KRT8P4-201ENST00000509735 1454 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC092068.3-201ENST00000587894 2016 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC007787.1-201ENST00000588095 1583 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 TBC1D3J-201ENST00000620719 1426 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 AL627231.1-201ENST00000394467 1125 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 HIST2H2BB-201ENST00000449108 381 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC100850.1-201ENST00000506768 649 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 BNIP3P13-201ENST00000599968 566 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC103810.10-201ENST00000606504 343 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC242376.2-201ENST00000619355 883 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 FO393412.1-201ENST00000619841 382 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 AC051619.9-201ENST00000623237 597 ntBASIC19.8■□□□□ 0.76
R3HDM1Q15032 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM1Q15032 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM1Q15032 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 AC026471.1-201ENST00000564629 3026 ntBASIC19.79■□□□□ 0.76
R3HDM1Q15032 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 AL138799.1-201ENST00000448213 1675 ntBASIC19.79■□□□□ 0.76
R3HDM1Q15032 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 KLF2P2-201ENST00000416807 1039 ntBASIC19.79■□□□□ 0.76
R3HDM1Q15032 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.79■□□□□ 0.76
R3HDM1Q15032 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM1Q15032 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HDM1Q15032 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms