Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CBX1P83916 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CBX1P83916 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CBX1P83916 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CBX1P83916 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX1P83916 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 AC096633.1-201ENST00000422446 749 ntBASIC16.83■□□□□ 0.28
CBX1P83916 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX1P83916 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.83■□□□□ 0.28
CBX1P83916 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX1P83916 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.83■□□□□ 0.28
CBX1P83916 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.83■□□□□ 0.28
CBX1P83916 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CBX1P83916 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CBX1P83916 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 PCGF3-213ENST00000620529 1899 ntBASIC16.82■□□□□ 0.28
CBX1P83916 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 SNX33P1-201ENST00000592116 1762 ntBASIC16.82■□□□□ 0.28
CBX1P83916 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 AC010460.3-201ENST00000511359 1579 ntBASIC16.82■□□□□ 0.28
CBX1P83916 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.82■□□□□ 0.28
CBX1P83916 KRT8P44-201ENST00000441609 1350 ntBASIC16.82■□□□□ 0.28
CBX1P83916 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.82■□□□□ 0.28
CBX1P83916 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.82■□□□□ 0.28
CBX1P83916 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CBX1P83916 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.82■□□□□ 0.28
CBX1P83916 AC026271.3-201ENST00000571884 352 ntBASIC16.82■□□□□ 0.28
CBX1P83916 AL353708.3-201ENST00000610272 989 ntBASIC16.82■□□□□ 0.28
CBX1P83916 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.82■□□□□ 0.28
CBX1P83916 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 AC011474.4-201ENST00000623523 2076 ntBASIC16.82■□□□□ 0.28
CBX1P83916 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
CBX1P83916 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBX1P83916 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.81■□□□□ 0.28
CBX1P83916 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBX1P83916 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
CBX1P83916 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 KRT16P1-201ENST00000399124 1418 ntBASIC16.81■□□□□ 0.28
CBX1P83916 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX1P83916 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 AC004899.2-201ENST00000622993 3860 ntBASIC16.81■□□□□ 0.28
CBX1P83916 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.81■□□□□ 0.28
CBX1P83916 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBX1P83916 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CBX1P83916 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.81■□□□□ 0.28
CBX1P83916 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 PGM5P2-202ENST00000637225 1043 ntBASIC16.81■□□□□ 0.28
CBX1P83916 AL031985.4-201ENST00000642138 673 ntBASIC16.81■□□□□ 0.28
CBX1P83916 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBX1P83916 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CBX1P83916 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms