Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GABREP78334 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.22■□□□□ 0.03
GABREP78334 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.22■□□□□ 0.03
GABREP78334 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.22■□□□□ 0.03
GABREP78334 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.22■□□□□ 0.03
GABREP78334 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.22■□□□□ 0.03
GABREP78334 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.22■□□□□ 0.03
GABREP78334 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 MIR4321-201ENST00000592276 80 ntBASIC15.22■□□□□ 0.03
GABREP78334 AL158212.4-201ENST00000624062 1286 ntBASIC15.22■□□□□ 0.03
GABREP78334 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GABREP78334 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
GABREP78334 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.22■□□□□ 0.03
GABREP78334 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 NKILA-202ENST00000614771 2598 ntBASIC15.22■□□□□ 0.03
GABREP78334 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABREP78334 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GABREP78334 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 Z97205.2-201ENST00000564697 1639 ntBASIC15.21■□□□□ 0.03
GABREP78334 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.21■□□□□ 0.03
GABREP78334 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GABREP78334 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.21■□□□□ 0.03
GABREP78334 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 AC092933.1-201ENST00000393644 945 ntBASIC15.21■□□□□ 0.03
GABREP78334 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 HAUS4P1-201ENST00000406739 1145 ntBASIC15.21■□□□□ 0.03
GABREP78334 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.21■□□□□ 0.03
GABREP78334 ACTG1P3-201ENST00000431775 1114 ntBASIC15.21■□□□□ 0.03
GABREP78334 BCRP2-202ENST00000447763 634 ntBASIC15.21■□□□□ 0.03
GABREP78334 BCRP6-201ENST00000510112 632 ntBASIC15.21■□□□□ 0.03
GABREP78334 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.21■□□□□ 0.03
GABREP78334 BCRP7-201ENST00000511549 544 ntBASIC15.21■□□□□ 0.03
GABREP78334 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.21■□□□□ 0.03
GABREP78334 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.21■□□□□ 0.03
GABREP78334 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.21■□□□□ 0.03
GABREP78334 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABREP78334 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
GABREP78334 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.02
GABREP78334 AC020907.1-201ENST00000616460 1350 ntBASIC15.21■□□□□ 0.02
GABREP78334 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GABREP78334 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABREP78334 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABREP78334 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.21■□□□□ 0.02
GABREP78334 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABREP78334 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GABREP78334 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.21■□□□□ 0.02
GABREP78334 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 PCGF3-213ENST00000620529 1899 ntBASIC15.2■□□□□ 0.02
GABREP78334 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.2■□□□□ 0.02
GABREP78334 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABREP78334 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.2■□□□□ 0.02
GABREP78334 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.2■□□□□ 0.02
GABREP78334 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.2■□□□□ 0.02
GABREP78334 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.2■□□□□ 0.02
GABREP78334 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms