Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 MCCD1P2-201ENST00000423228 335 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.15□□□□□ -0.14
SEC61A1P61619 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.15□□□□□ -0.14
SEC61A1P61619 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.15□□□□□ -0.14
SEC61A1P61619 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.15□□□□□ -0.14
SEC61A1P61619 PDPK2P-202ENST00000562415 1191 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 MIR3687-2-201ENST00000577708 61 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 AL078644.1-201ENST00000609881 752 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 MIR3687-1-201ENST00000614492 61 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 AL691403.2-201ENST00000618460 490 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 AL365209.1-201ENST00000624418 6473 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SEC61A1P61619 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61A1P61619 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.15□□□□□ -0.14
SEC61A1P61619 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.15□□□□□ -0.14
SEC61A1P61619 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AP005117.1-202ENST00000581724 1908 ntBASIC14.14□□□□□ -0.15
SEC61A1P61619 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SEC61A1P61619 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 FAM185BP-201ENST00000443595 716 ntBASIC14.14□□□□□ -0.15
SEC61A1P61619 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AC107918.2-201ENST00000530817 355 ntBASIC14.14□□□□□ -0.15
SEC61A1P61619 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.14□□□□□ -0.15
SEC61A1P61619 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 LINC00895-201ENST00000629028 1637 ntBASIC14.14□□□□□ -0.15
SEC61A1P61619 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SEC61A1P61619 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SEC61A1P61619 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SEC61A1P61619 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61A1P61619 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61A1P61619 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SEC61A1P61619 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SEC61A1P61619 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms