Protein–RNA interactions for Protein: P61204

ARF3, ADP-ribosylation factor 3, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3P61204 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARF3P61204 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARF3P61204 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ARF3P61204 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARF3P61204 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.32■□□□□ 0.04
ARF3P61204 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.32■□□□□ 0.04
ARF3P61204 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ARF3P61204 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.31■□□□□ 0.04
ARF3P61204 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.31■□□□□ 0.04
ARF3P61204 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.31■□□□□ 0.04
ARF3P61204 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.31■□□□□ 0.04
ARF3P61204 INGX-202ENST00000489074 768 ntBASIC15.31■□□□□ 0.04
ARF3P61204 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.31■□□□□ 0.04
ARF3P61204 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.31■□□□□ 0.04
ARF3P61204 AC087499.5-201ENST00000452760 1342 ntBASIC15.31■□□□□ 0.04
ARF3P61204 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
ARF3P61204 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.31■□□□□ 0.04
ARF3P61204 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ARF3P61204 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ARF3P61204 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 BCRP1-201ENST00000444246 691 ntBASIC15.3■□□□□ 0.04
ARF3P61204 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.3■□□□□ 0.04
ARF3P61204 KRT8P37-201ENST00000451609 1420 ntBASIC15.3■□□□□ 0.04
ARF3P61204 SERBP1P3-201ENST00000459980 809 ntBASIC15.3■□□□□ 0.04
ARF3P61204 AC004890.2-204ENST00000481968 304 ntBASIC15.3■□□□□ 0.04
ARF3P61204 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.3■□□□□ 0.04
ARF3P61204 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 SPCS2P1-201ENST00000561636 679 ntBASIC15.3■□□□□ 0.04
ARF3P61204 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.3■□□□□ 0.04
ARF3P61204 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ARF3P61204 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.3■□□□□ 0.04
ARF3P61204 AL096865.1-201ENST00000606796 927 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms