Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.17□□□□□ -0.14
UBE2NP61088 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UBE2NP61088 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.16□□□□□ -0.14
UBE2NP61088 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
UBE2NP61088 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 MIR943-201ENST00000401286 94 ntBASIC14.16□□□□□ -0.14
UBE2NP61088 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.16□□□□□ -0.14
UBE2NP61088 CYMP-203ENST00000474680 1263 ntBASIC14.16□□□□□ -0.14
UBE2NP61088 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.16□□□□□ -0.14
UBE2NP61088 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.16□□□□□ -0.14
UBE2NP61088 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UBE2NP61088 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 AC105021.1-202ENST00000570572 669 ntBASIC14.16□□□□□ -0.14
UBE2NP61088 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.16□□□□□ -0.14
UBE2NP61088 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 AC092364.2-201ENST00000596710 2692 ntBASIC14.16□□□□□ -0.14
UBE2NP61088 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBE2NP61088 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
UBE2NP61088 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBE2NP61088 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.15□□□□□ -0.14
UBE2NP61088 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBE2NP61088 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBE2NP61088 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.15□□□□□ -0.14
UBE2NP61088 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.15□□□□□ -0.14
UBE2NP61088 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.15□□□□□ -0.14
UBE2NP61088 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 AC051619.7-201ENST00000568314 623 ntBASIC14.15□□□□□ -0.14
UBE2NP61088 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.15□□□□□ -0.14
UBE2NP61088 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.15□□□□□ -0.14
UBE2NP61088 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2NP61088 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2NP61088 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBE2NP61088 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
UBE2NP61088 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
UBE2NP61088 CETN4P-206ENST00000642099 2168 ntBASIC14.15□□□□□ -0.15
UBE2NP61088 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms