Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS1BP61024 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
CKS1BP61024 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
CKS1BP61024 AL645929.1-201ENST00000420084 975 ntBASIC11.36□□□□□ -0.59
CKS1BP61024 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
CKS1BP61024 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS1BP61024 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 AL138831.2-201ENST00000606564 490 ntBASIC11.36□□□□□ -0.59
CKS1BP61024 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.36□□□□□ -0.59
CKS1BP61024 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.36□□□□□ -0.59
CKS1BP61024 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 AL353593.2-201ENST00000602529 1483 ntBASIC11.36□□□□□ -0.59
CKS1BP61024 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.36□□□□□ -0.59
CKS1BP61024 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
CKS1BP61024 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CKS1BP61024 DNM1P41-201ENST00000623634 3350 ntBASIC11.36□□□□□ -0.59
CKS1BP61024 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CKS1BP61024 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
CKS1BP61024 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CKS1BP61024 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CKS1BP61024 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.35□□□□□ -0.59
CKS1BP61024 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
CKS1BP61024 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
CKS1BP61024 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms