Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 MIR193BHG-211ENST00000641433 5365 ntBASIC14.14□□□□□ -0.15
DEFA3P59666 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.14□□□□□ -0.15
DEFA3P59666 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DEFA3P59666 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
DEFA3P59666 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
DEFA3P59666 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
DEFA3P59666 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 AC003669.1-201ENST00000334569 611 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 MIR638-201ENST00000385237 100 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 AC098934.4-201ENST00000564127 592 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 AD001527.2-201ENST00000622994 785 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 CICP17-201ENST00000418553 2377 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 AC126365.1-201ENST00000578585 1514 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
DEFA3P59666 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
DEFA3P59666 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.13□□□□□ -0.15
DEFA3P59666 AC092338.2-201ENST00000568827 1415 ntBASIC14.13□□□□□ -0.15
DEFA3P59666 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DEFA3P59666 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
DEFA3P59666 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.12□□□□□ -0.15
DEFA3P59666 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 AL592424.1-201ENST00000563624 1536 ntBASIC14.12□□□□□ -0.15
DEFA3P59666 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 SLC22A20-204ENST00000530038 1673 ntBASIC14.12□□□□□ -0.15
DEFA3P59666 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.12□□□□□ -0.15
DEFA3P59666 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.12□□□□□ -0.15
DEFA3P59666 FAM197Y1-201ENST00000421178 764 ntBASIC14.12□□□□□ -0.15
DEFA3P59666 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.12□□□□□ -0.15
DEFA3P59666 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 AC133041.1-202ENST00000642053 222 ntBASIC14.12□□□□□ -0.15
DEFA3P59666 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
DEFA3P59666 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
DEFA3P59666 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEFA3P59666 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms