Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 ABBA01031663.1-201ENST00000635630 790 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC22.52■■□□□ 1.2
CLTCL1P53675 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.52■■□□□ 1.2
CLTCL1P53675 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLTCL1P53675 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLTCL1P53675 FZD10-202ENST00000539839 3282 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 AL133338.1-201ENST00000565695 1517 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC22.52■■□□□ 1.2
CLTCL1P53675 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CLTCL1P53675 MFF-204ENST00000353339 2186 ntTSL 5 BASIC22.52■■□□□ 1.2
CLTCL1P53675 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLTCL1P53675 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 BRWD1P1-201ENST00000401091 371 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 FAM197Y7-201ENST00000432892 766 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 AC007969.1-201ENST00000433675 447 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC22.52■■□□□ 1.2
CLTCL1P53675 HNRNPA1P48-202ENST00000565308 961 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 KSR1-207ENST00000578981 748 ntTSL 4 BASIC22.52■■□□□ 1.2
CLTCL1P53675 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 AC010328.2-201ENST00000597698 1111 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 AC005695.3-201ENST00000614522 232 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 AC008687.7-202ENST00000637404 953 ntBASIC22.52■■□□□ 1.2
CLTCL1P53675 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLTCL1P53675 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.51■■□□□ 1.19
CLTCL1P53675 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC22.51■■□□□ 1.19
CLTCL1P53675 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC22.51■■□□□ 1.19
CLTCL1P53675 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CLTCL1P53675 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC22.51■■□□□ 1.19
CLTCL1P53675 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC22.51■■□□□ 1.19
CLTCL1P53675 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CLTCL1P53675 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLTCL1P53675 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 CD74-212ENST00000524315 584 ntTSL 5 BASIC22.5■■□□□ 1.19
CLTCL1P53675 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC22.5■■□□□ 1.19
CLTCL1P53675 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CLTCL1P53675 NKILA-202ENST00000614771 2598 ntBASIC22.5■■□□□ 1.19
CLTCL1P53675 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC22.5■■□□□ 1.19
CLTCL1P53675 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLTCL1P53675 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.5■■□□□ 1.19
CLTCL1P53675 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CLTCL1P53675 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC22.49■■□□□ 1.19
CLTCL1P53675 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 AL596087.1-201ENST00000400979 1969 ntBASIC22.49■■□□□ 1.19
CLTCL1P53675 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 AC018695.7-201ENST00000624587 2492 ntBASIC22.49■■□□□ 1.19
CLTCL1P53675 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CLTCL1P53675 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLTCL1P53675 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC22.49■■□□□ 1.19
CLTCL1P53675 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms