Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
EFNA4P52798 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNA4P52798 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
EFNA4P52798 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNA4P52798 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
EFNA4P52798 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 ME2P1-201ENST00000426028 1970 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
EFNA4P52798 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 AL442647.2-201ENST00000429864 857 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 AC234783.1-201ENST00000441761 496 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 TARDBPP1-201ENST00000442013 1203 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.4□□□□□ -0.26
EFNA4P52798 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 AC133539.2-201ENST00000604757 467 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 AL158212.4-201ENST00000624062 1286 ntBASIC13.4□□□□□ -0.26
EFNA4P52798 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
EFNA4P52798 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA4P52798 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA4P52798 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
EFNA4P52798 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
EFNA4P52798 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.4□□□□□ -0.27
EFNA4P52798 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
EFNA4P52798 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA4P52798 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 PHKG1P2-201ENST00000457537 863 ntBASIC13.39□□□□□ -0.27
EFNA4P52798 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA4P52798 AL391069.4-201ENST00000609583 481 ntBASIC13.39□□□□□ -0.27
EFNA4P52798 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA4P52798 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA4P52798 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.39□□□□□ -0.27
EFNA4P52798 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
EFNA4P52798 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
EFNA4P52798 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA4P52798 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA4P52798 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
EFNA4P52798 TNRC18P3-201ENST00000441896 2691 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms