Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 KRT18P3-201ENST00000451602 1288 ntBASIC14.34□□□□□ -0.11
SRP9P49458 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 AC107918.2-201ENST00000530817 355 ntBASIC14.34□□□□□ -0.11
SRP9P49458 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 AC096734.2-201ENST00000562054 433 ntBASIC14.34□□□□□ -0.11
SRP9P49458 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.34□□□□□ -0.11
SRP9P49458 AC140113.2-201ENST00000604370 208 ntBASIC14.34□□□□□ -0.11
SRP9P49458 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 CICP24-201ENST00000605464 2705 ntBASIC14.34□□□□□ -0.11
SRP9P49458 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SRP9P49458 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.33□□□□□ -0.11
SRP9P49458 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.33□□□□□ -0.11
SRP9P49458 AL671710.1-201ENST00000610245 2349 ntBASIC14.33□□□□□ -0.11
SRP9P49458 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.33□□□□□ -0.11
SRP9P49458 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.33□□□□□ -0.11
SRP9P49458 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.33□□□□□ -0.11
SRP9P49458 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRP9P49458 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.33□□□□□ -0.12
SRP9P49458 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.33□□□□□ -0.12
SRP9P49458 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 AC026748.1-201ENST00000624349 3251 ntBASIC14.33□□□□□ -0.12
SRP9P49458 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.33□□□□□ -0.12
SRP9P49458 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SRP9P49458 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 AL513480.1-201ENST00000451731 511 ntBASIC14.33□□□□□ -0.12
SRP9P49458 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SRP9P49458 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
SRP9P49458 AC067930.6-201ENST00000623257 4947 ntBASIC14.33□□□□□ -0.12
SRP9P49458 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SRP9P49458 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.32□□□□□ -0.12
SRP9P49458 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 AC006486.2-201ENST00000624246 2199 ntBASIC14.32□□□□□ -0.12
SRP9P49458 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.32□□□□□ -0.12
SRP9P49458 MIR940-201ENST00000401276 94 ntBASIC14.32□□□□□ -0.12
SRP9P49458 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.32□□□□□ -0.12
SRP9P49458 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.32□□□□□ -0.12
SRP9P49458 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SRP9P49458 MPDU1-223ENST00000582151 728 ntBASIC14.32□□□□□ -0.12
SRP9P49458 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SRP9P49458 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.32□□□□□ -0.12
SRP9P49458 AC023141.13-201ENST00000604991 943 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms