Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPFP49454 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPFP49454 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.78■□□□□ 0.44
CENPFP49454 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CENPFP49454 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CENPFP49454 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.77■□□□□ 0.44
CENPFP49454 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.77■□□□□ 0.44
CENPFP49454 AC145423.3-201ENST00000615987 467 ntBASIC17.77■□□□□ 0.44
CENPFP49454 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
CENPFP49454 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CENPFP49454 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.77■□□□□ 0.44
CENPFP49454 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.77■□□□□ 0.44
CENPFP49454 POM121L10P-201ENST00000436994 1285 ntBASIC17.77■□□□□ 0.44
CENPFP49454 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.77■□□□□ 0.44
CENPFP49454 HOMER2P2-201ENST00000451621 847 ntBASIC17.77■□□□□ 0.44
CENPFP49454 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.77■□□□□ 0.44
CENPFP49454 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.77■□□□□ 0.44
CENPFP49454 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.77■□□□□ 0.44
CENPFP49454 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.77■□□□□ 0.44
CENPFP49454 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CENPFP49454 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.77■□□□□ 0.44
CENPFP49454 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 AC004987.2-201ENST00000395959 1148 ntBASIC17.77■□□□□ 0.43
CENPFP49454 IQSEC3P1-201ENST00000538799 536 ntBASIC17.77■□□□□ 0.43
CENPFP49454 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.77■□□□□ 0.43
CENPFP49454 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.77■□□□□ 0.43
CENPFP49454 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.77■□□□□ 0.43
CENPFP49454 AL023775.1-201ENST00000454907 1746 ntBASIC17.77■□□□□ 0.43
CENPFP49454 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 TUBB8P12-201ENST00000308911 1335 ntBASIC17.77■□□□□ 0.43
CENPFP49454 TUBB7P-202ENST00000428444 1305 ntBASIC17.77■□□□□ 0.43
CENPFP49454 TUBB8P7-204ENST00000567960 1332 ntBASIC17.77■□□□□ 0.43
CENPFP49454 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CENPFP49454 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.77■□□□□ 0.43
CENPFP49454 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CENPFP49454 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.76■□□□□ 0.43
CENPFP49454 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.76■□□□□ 0.43
CENPFP49454 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CENPFP49454 SERPINA13P-202ENST00000478994 924 ntBASIC17.76■□□□□ 0.43
CENPFP49454 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CENPFP49454 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.76■□□□□ 0.43
CENPFP49454 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 HSPB1P2-201ENST00000448722 546 ntBASIC17.76■□□□□ 0.43
CENPFP49454 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.76■□□□□ 0.43
CENPFP49454 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.76■□□□□ 0.43
CENPFP49454 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.76■□□□□ 0.43
CENPFP49454 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CENPFP49454 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.76■□□□□ 0.43
CENPFP49454 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CENPFP49454 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.75■□□□□ 0.43
CENPFP49454 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.75■□□□□ 0.43
CENPFP49454 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.75■□□□□ 0.43
CENPFP49454 CU633904.3-201ENST00000624042 1029 ntBASIC17.75■□□□□ 0.43
CENPFP49454 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
CENPFP49454 AC005915.1-201ENST00000624912 2018 ntBASIC17.75■□□□□ 0.43
CENPFP49454 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.75■□□□□ 0.43
CENPFP49454 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 AC078925.2-201ENST00000624013 1973 ntBASIC17.75■□□□□ 0.43
CENPFP49454 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
CENPFP49454 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.75■□□□□ 0.43
CENPFP49454 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 AC022211.2-201ENST00000585075 2527 ntBASIC17.75■□□□□ 0.43
CENPFP49454 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CENPFP49454 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CENPFP49454 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms