Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF5P43026 AC018892.3-201ENST00000623986 2499 ntBASIC15.66■□□□□ 0.1
GDF5P43026 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
GDF5P43026 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF5P43026 DNAJB3-201ENST00000446806 729 ntBASIC15.66■□□□□ 0.1
GDF5P43026 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 KRT8P23-201ENST00000560090 1207 ntBASIC15.66■□□□□ 0.1
GDF5P43026 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.66■□□□□ 0.1
GDF5P43026 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.66■□□□□ 0.1
GDF5P43026 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
GDF5P43026 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF5P43026 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GDF5P43026 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.66■□□□□ 0.1
GDF5P43026 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
GDF5P43026 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.66■□□□□ 0.1
GDF5P43026 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GDF5P43026 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GDF5P43026 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF5P43026 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF5P43026 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GDF5P43026 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GDF5P43026 AP002414.2-201ENST00000591780 3365 ntBASIC15.65■□□□□ 0.1
GDF5P43026 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
GDF5P43026 AC011477.6-201ENST00000604980 1927 ntBASIC15.65■□□□□ 0.1
GDF5P43026 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 FAM220BP-201ENST00000377689 816 ntBASIC15.65■□□□□ 0.1
GDF5P43026 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF5P43026 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 YBX1P5-201ENST00000509441 847 ntBASIC15.65■□□□□ 0.1
GDF5P43026 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.65■□□□□ 0.1
GDF5P43026 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF5P43026 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.65■□□□□ 0.1
GDF5P43026 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.65■□□□□ 0.1
GDF5P43026 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.65■□□□□ 0.1
GDF5P43026 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.65■□□□□ 0.1
GDF5P43026 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 AL691432.1-201ENST00000596308 1422 ntBASIC15.65■□□□□ 0.1
GDF5P43026 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 AP3S2-216ENST00000617003 1561 ntBASIC15.65■□□□□ 0.1
GDF5P43026 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
GDF5P43026 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 AP001282.1-201ENST00000531301 1499 ntBASIC15.65■□□□□ 0.1
GDF5P43026 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GDF5P43026 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.64■□□□□ 0.1
GDF5P43026 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
GDF5P43026 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
GDF5P43026 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF5P43026 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
GDF5P43026 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.64■□□□□ 0.09
GDF5P43026 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GDF5P43026 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF5P43026 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.64■□□□□ 0.09
GDF5P43026 RPSAP43-201ENST00000402237 625 ntBASIC15.64■□□□□ 0.09
GDF5P43026 AC004461.1-201ENST00000412461 403 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms