Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.16□□□□□ -0.3
CEACAM3P40198 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.16□□□□□ -0.3
CEACAM3P40198 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.16□□□□□ -0.3
CEACAM3P40198 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.16□□□□□ -0.3
CEACAM3P40198 AC004449.1-201ENST00000564240 433 ntBASIC13.16□□□□□ -0.3
CEACAM3P40198 AC018529.1-201ENST00000613063 361 ntBASIC13.16□□□□□ -0.3
CEACAM3P40198 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.16□□□□□ -0.3
CEACAM3P40198 AP001059.3-201ENST00000619053 235 ntBASIC13.16□□□□□ -0.3
CEACAM3P40198 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.16□□□□□ -0.3
CEACAM3P40198 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.16□□□□□ -0.3
CEACAM3P40198 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CEACAM3P40198 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CEACAM3P40198 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 FOXO1B-201ENST00000504678 1527 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AL596087.1-201ENST00000400979 1969 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CEACAM3P40198 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 CNN2P2-201ENST00000443536 909 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 CNN2P3-201ENST00000450201 906 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AC243562.2-201ENST00000561247 970 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 AC093520.2-201ENST00000561830 333 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 AC061975.2-201ENST00000581722 295 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AL136317.3-201ENST00000618497 906 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 LINC00628-201ENST00000628516 1289 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AL035456.1-201ENST00000456064 1369 ntBASIC13.15□□□□□ -0.3
CEACAM3P40198 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CEACAM3P40198 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.15□□□□□ -0.3
CEACAM3P40198 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.15□□□□□ -0.3
CEACAM3P40198 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.15□□□□□ -0.31
CEACAM3P40198 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.15□□□□□ -0.31
CEACAM3P40198 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CEACAM3P40198 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CEACAM3P40198 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.14□□□□□ -0.31
CEACAM3P40198 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.14□□□□□ -0.31
CEACAM3P40198 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CEACAM3P40198 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms