Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 AC136604.1-201ENST00000418535 575 ntBASIC20.12■□□□□ 0.81
COL15A1P39059 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL15A1P39059 AC084346.2-201ENST00000607097 949 ntBASIC20.12■□□□□ 0.81
COL15A1P39059 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 AP001282.1-201ENST00000531301 1499 ntBASIC20.12■□□□□ 0.81
COL15A1P39059 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL15A1P39059 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.12■□□□□ 0.81
COL15A1P39059 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.12■□□□□ 0.81
COL15A1P39059 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL15A1P39059 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 BAATP1-201ENST00000412284 1225 ntBASIC20.11■□□□□ 0.81
COL15A1P39059 BCYRN1-201ENST00000418539 200 ntBASIC20.11■□□□□ 0.81
COL15A1P39059 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.11■□□□□ 0.81
COL15A1P39059 KRT90P-201ENST00000549264 1064 ntBASIC20.11■□□□□ 0.81
COL15A1P39059 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.11■□□□□ 0.81
COL15A1P39059 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 AC244093.1-201ENST00000610837 814 ntBASIC20.11■□□□□ 0.81
COL15A1P39059 AC244669.2-201ENST00000612320 853 ntBASIC20.11■□□□□ 0.81
COL15A1P39059 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
COL15A1P39059 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.11■□□□□ 0.81
COL15A1P39059 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL15A1P39059 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 MIR648-201ENST00000385046 94 ntBASIC20.1■□□□□ 0.81
COL15A1P39059 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 AC007551.1-201ENST00000457394 519 ntBASIC20.1■□□□□ 0.81
COL15A1P39059 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.1■□□□□ 0.81
COL15A1P39059 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.1■□□□□ 0.81
COL15A1P39059 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.1■□□□□ 0.81
COL15A1P39059 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 AC009486.1-201ENST00000569860 813 ntBASIC20.1■□□□□ 0.81
COL15A1P39059 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL15A1P39059 GNRHR2-203ENST00000581100 1187 ntBASIC20.1■□□□□ 0.81
COL15A1P39059 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 PCDHA14-201ENST00000506751 2298 ntBASIC20.1■□□□□ 0.81
COL15A1P39059 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL15A1P39059 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.1■□□□□ 0.81
COL15A1P39059 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.1■□□□□ 0.81
COL15A1P39059 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.1■□□□□ 0.81
COL15A1P39059 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.1■□□□□ 0.81
COL15A1P39059 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL15A1P39059 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.09■□□□□ 0.81
COL15A1P39059 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.09■□□□□ 0.81
COL15A1P39059 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms