Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPH2P23942 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.26■□□□□ 0.03
PRPH2P23942 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPH2P23942 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PRPH2P23942 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPH2P23942 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRPH2P23942 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRPH2P23942 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRPH2P23942 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PRPH2P23942 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
PRPH2P23942 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRPH2P23942 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPH2P23942 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPH2P23942 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PRPH2P23942 AP3S2-216ENST00000617003 1561 ntBASIC15.25■□□□□ 0.03
PRPH2P23942 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRPH2P23942 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRPH2P23942 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPH2P23942 AC069335.1-201ENST00000489972 472 ntBASIC15.25■□□□□ 0.03
PRPH2P23942 KRT18P58-201ENST00000527480 1120 ntBASIC15.25■□□□□ 0.03
PRPH2P23942 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
PRPH2P23942 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPH2P23942 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPH2P23942 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.25■□□□□ 0.03
PRPH2P23942 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.25■□□□□ 0.03
PRPH2P23942 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 AC144831.1-201ENST00000573312 2656 ntBASIC15.25■□□□□ 0.03
PRPH2P23942 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRPH2P23942 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRPH2P23942 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRPH2P23942 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPH2P23942 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPH2P23942 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 AP003680.1-201ENST00000598970 3660 ntBASIC15.24■□□□□ 0.03
PRPH2P23942 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
PRPH2P23942 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 AC026396.1-201ENST00000419388 421 ntBASIC15.24■□□□□ 0.03
PRPH2P23942 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.24■□□□□ 0.03
PRPH2P23942 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 MTDHP5-201ENST00000598980 586 ntBASIC15.24■□□□□ 0.03
PRPH2P23942 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.24■□□□□ 0.03
PRPH2P23942 AC055717.3-201ENST00000622967 595 ntBASIC15.24■□□□□ 0.03
PRPH2P23942 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.24■□□□□ 0.03
PRPH2P23942 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRPH2P23942 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRPH2P23942 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms