Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC244250.3-201ENST00000620749 366 ntBASIC12.8□□□□□ -0.36
NF1P21359 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC12.8□□□□□ -0.36
NF1P21359 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NF1P21359 HYMAI-201ENST00000635591 3347 ntBASIC12.79□□□□□ -0.36
NF1P21359 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 AC022137.2-201ENST00000503482 481 ntBASIC12.79□□□□□ -0.36
NF1P21359 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.79□□□□□ -0.36
NF1P21359 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.79□□□□□ -0.36
NF1P21359 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.79□□□□□ -0.36
NF1P21359 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.79□□□□□ -0.36
NF1P21359 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NF1P21359 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 AC007787.1-201ENST00000588095 1583 ntBASIC12.79□□□□□ -0.36
NF1P21359 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NF1P21359 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.79□□□□□ -0.36
NF1P21359 AC012158.2-201ENST00000536546 354 ntBASIC12.79□□□□□ -0.36
NF1P21359 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.79□□□□□ -0.36
NF1P21359 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.79□□□□□ -0.36
NF1P21359 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 AC105137.3-201ENST00000617588 984 ntBASIC12.79□□□□□ -0.36
NF1P21359 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.79□□□□□ -0.36
NF1P21359 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.79□□□□□ -0.36
NF1P21359 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NF1P21359 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.78□□□□□ -0.36
NF1P21359 AL138709.1-201ENST00000614840 1693 ntBASIC12.78□□□□□ -0.36
NF1P21359 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 GPAA1P2-202ENST00000606848 1787 ntBASIC12.78□□□□□ -0.36
NF1P21359 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
NF1P21359 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 UROS-201ENST00000368774 744 ntTSL 2 BASIC12.78□□□□□ -0.36
NF1P21359 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NF1P21359 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.78□□□□□ -0.36
NF1P21359 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.78□□□□□ -0.36
NF1P21359 AC004522.1-201ENST00000419978 654 ntBASIC12.78□□□□□ -0.36
NF1P21359 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.78□□□□□ -0.36
NF1P21359 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.78□□□□□ -0.36
NF1P21359 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 AC013467.2-201ENST00000605472 835 ntBASIC12.78□□□□□ -0.36
NF1P21359 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.78□□□□□ -0.36
NF1P21359 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.78□□□□□ -0.36
NF1P21359 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.78□□□□□ -0.36
NF1P21359 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.78□□□□□ -0.36
NF1P21359 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NF1P21359 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NF1P21359 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NF1P21359 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.78□□□□□ -0.36
NF1P21359 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms