Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NFKB1P19838 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.35■□□□□ 0.21
NFKB1P19838 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 GPS2P2-201ENST00000430745 888 ntBASIC16.35■□□□□ 0.21
NFKB1P19838 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.35■□□□□ 0.21
NFKB1P19838 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.35■□□□□ 0.21
NFKB1P19838 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.35■□□□□ 0.21
NFKB1P19838 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.35■□□□□ 0.21
NFKB1P19838 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.35■□□□□ 0.21
NFKB1P19838 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 AC004835.2-201ENST00000603762 682 ntBASIC16.35■□□□□ 0.21
NFKB1P19838 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
NFKB1P19838 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFKB1P19838 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
NFKB1P19838 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.35■□□□□ 0.21
NFKB1P19838 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 RBPMS2P1-201ENST00000437762 623 ntBASIC16.34■□□□□ 0.21
NFKB1P19838 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.34■□□□□ 0.21
NFKB1P19838 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.34■□□□□ 0.21
NFKB1P19838 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.34■□□□□ 0.21
NFKB1P19838 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NFKB1P19838 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.34■□□□□ 0.21
NFKB1P19838 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.34■□□□□ 0.21
NFKB1P19838 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NFKB1P19838 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.34■□□□□ 0.21
NFKB1P19838 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NFKB1P19838 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFKB1P19838 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.34■□□□□ 0.21
NFKB1P19838 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NFKB1P19838 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NFKB1P19838 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NFKB1P19838 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NFKB1P19838 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NFKB1P19838 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NFKB1P19838 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NFKB1P19838 AC018892.3-201ENST00000623986 2499 ntBASIC16.33■□□□□ 0.2
NFKB1P19838 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.33■□□□□ 0.2
NFKB1P19838 AL139010.1-201ENST00000454878 894 ntBASIC16.33■□□□□ 0.2
NFKB1P19838 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.33■□□□□ 0.2
NFKB1P19838 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.33■□□□□ 0.2
NFKB1P19838 AC009093.7-201ENST00000623853 1223 ntBASIC16.33■□□□□ 0.2
NFKB1P19838 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.33■□□□□ 0.2
NFKB1P19838 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.33■□□□□ 0.2
NFKB1P19838 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms