Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KRT4P19013 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT4P19013 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT4P19013 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT4P19013 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.17■□□□□ 0.18
KRT4P19013 HMGA1P7-201ENST00000406908 502 ntBASIC16.17■□□□□ 0.18
KRT4P19013 PMS2P4-201ENST00000412466 1052 ntBASIC16.17■□□□□ 0.18
KRT4P19013 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT4P19013 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT4P19013 OR7E47P-204ENST00000575924 449 ntBASIC16.17■□□□□ 0.18
KRT4P19013 MIR3909-201ENST00000579518 119 ntBASIC16.17■□□□□ 0.18
KRT4P19013 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
KRT4P19013 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 ACTL9-202ENST00000612068 1252 ntBASIC16.17■□□□□ 0.18
KRT4P19013 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KRT4P19013 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT4P19013 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT4P19013 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT4P19013 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT4P19013 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 MRPL20P1-201ENST00000400819 433 ntBASIC16.16■□□□□ 0.18
KRT4P19013 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.16■□□□□ 0.18
KRT4P19013 FAM185BP-201ENST00000443595 716 ntBASIC16.16■□□□□ 0.18
KRT4P19013 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 AC245100.5-201ENST00000452108 331 ntBASIC16.16■□□□□ 0.18
KRT4P19013 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
KRT4P19013 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 AC112693.3-201ENST00000624819 1983 ntBASIC16.16■□□□□ 0.18
KRT4P19013 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
KRT4P19013 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
KRT4P19013 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT4P19013 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT4P19013 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT4P19013 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT4P19013 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT4P19013 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT4P19013 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT4P19013 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT4P19013 TSPY19P-201ENST00000418461 509 ntBASIC16.15■□□□□ 0.18
KRT4P19013 RPS2P1-201ENST00000434010 821 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms