Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 TPM3P8-201ENST00000330554 643 ntBASIC26.81■■□□□ 1.88
CFTRP13569 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 CRCP-204ENST00000398684 492 ntTSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 EIF3FP3-201ENST00000434851 1086 ntBASIC26.81■■□□□ 1.88
CFTRP13569 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 MSRA-203ENST00000441698 788 ntTSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 CHMP1AP1-201ENST00000445563 662 ntBASIC26.81■■□□□ 1.88
CFTRP13569 AL133466.1-201ENST00000447582 150 ntBASIC26.81■■□□□ 1.88
CFTRP13569 EEF1DP6-201ENST00000449232 372 ntBASIC26.81■■□□□ 1.88
CFTRP13569 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC26.81■■□□□ 1.88
CFTRP13569 AC013355.1-201ENST00000562625 723 ntBASIC26.81■■□□□ 1.88
CFTRP13569 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC26.81■■□□□ 1.88
CFTRP13569 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CFTRP13569 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
CFTRP13569 KRT8P14-201ENST00000414254 1442 ntBASIC26.81■■□□□ 1.88
CFTRP13569 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC26.81■■□□□ 1.88
CFTRP13569 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CFTRP13569 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC26.81■■□□□ 1.88
CFTRP13569 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CFTRP13569 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC26.81■■□□□ 1.88
CFTRP13569 AC106820.3-201ENST00000561653 397 ntBASIC26.81■■□□□ 1.88
CFTRP13569 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
CFTRP13569 MIR7845-201ENST00000618396 99 ntBASIC26.81■■□□□ 1.88
CFTRP13569 AP001002.3-201ENST00000623482 206 ntBASIC26.81■■□□□ 1.88
CFTRP13569 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC26.8■■□□□ 1.88
CFTRP13569 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC26.8■■□□□ 1.88
CFTRP13569 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 AL139094.1-201ENST00000405549 1188 ntBASIC26.8■■□□□ 1.88
CFTRP13569 FAM8A4P-201ENST00000435433 1213 ntBASIC26.8■■□□□ 1.88
CFTRP13569 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC26.8■■□□□ 1.88
CFTRP13569 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC26.8■■□□□ 1.88
CFTRP13569 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CFTRP13569 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CFTRP13569 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CFTRP13569 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CFTRP13569 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC26.79■■□□□ 1.88
CFTRP13569 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CFTRP13569 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC26.79■■□□□ 1.88
CFTRP13569 LBH-202ENST00000401506 485 ntTSL 3 BASIC26.79■■□□□ 1.88
CFTRP13569 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC26.79■■□□□ 1.88
CFTRP13569 AC069218.1-201ENST00000435269 762 ntBASIC26.79■■□□□ 1.88
CFTRP13569 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC26.79■■□□□ 1.88
CFTRP13569 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC26.79■■□□□ 1.88
CFTRP13569 AC026740.1-201ENST00000607068 791 ntBASIC26.79■■□□□ 1.88
CFTRP13569 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC26.79■■□□□ 1.88
CFTRP13569 ME2P1-201ENST00000426028 1970 ntBASIC26.79■■□□□ 1.88
CFTRP13569 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CFTRP13569 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC26.78■■□□□ 1.88
CFTRP13569 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CFTRP13569 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 DPM3-202ENST00000368399 517 ntBASIC26.78■■□□□ 1.88
CFTRP13569 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC26.78■■□□□ 1.88
CFTRP13569 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC26.78■■□□□ 1.88
CFTRP13569 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CFTRP13569 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC26.78■■□□□ 1.88
CFTRP13569 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC26.78■■□□□ 1.88
CFTRP13569 AL645608.8-201ENST00000606034 2086 ntBASIC26.77■■□□□ 1.88
CFTRP13569 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CFTRP13569 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
CFTRP13569 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CFTRP13569 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC26.77■■□□□ 1.88
CFTRP13569 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CFTRP13569 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC26.77■■□□□ 1.88
CFTRP13569 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC26.77■■□□□ 1.88
CFTRP13569 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC26.77■■□□□ 1.88
CFTRP13569 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms