Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT3P12035 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.95■□□□□ 0.3
KRT3P12035 AL691432.1-201ENST00000596308 1422 ntBASIC16.95■□□□□ 0.3
KRT3P12035 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT3P12035 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KRT3P12035 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
KRT3P12035 AC105917.1-201ENST00000506637 2539 ntBASIC16.94■□□□□ 0.3
KRT3P12035 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 AL627223.1-201ENST00000416693 442 ntBASIC16.94■□□□□ 0.3
KRT3P12035 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 KRT18P32-201ENST00000424695 1287 ntBASIC16.94■□□□□ 0.3
KRT3P12035 FAM58DP-201ENST00000428076 619 ntBASIC16.94■□□□□ 0.3
KRT3P12035 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.94■□□□□ 0.3
KRT3P12035 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.94■□□□□ 0.3
KRT3P12035 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 AC243562.2-201ENST00000561247 970 ntBASIC16.94■□□□□ 0.3
KRT3P12035 AC093520.2-201ENST00000561830 333 ntBASIC16.94■□□□□ 0.3
KRT3P12035 RARRES2P9-201ENST00000565168 469 ntBASIC16.94■□□□□ 0.3
KRT3P12035 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.94■□□□□ 0.3
KRT3P12035 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 AC004835.2-201ENST00000603762 682 ntBASIC16.94■□□□□ 0.3
KRT3P12035 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KRT3P12035 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KRT3P12035 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT3P12035 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 AC046158.3-201ENST00000624947 2558 ntBASIC16.93■□□□□ 0.3
KRT3P12035 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
KRT3P12035 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT3P12035 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT3P12035 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT3P12035 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT3P12035 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
KRT3P12035 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT3P12035 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms