Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SMIM17P0DL12 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMIM17P0DL12 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ABCD1P5-201ENST00000445663 754 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 LINC00265-3P-201ENST00000447588 903 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 TSSC2-201ENST00000450217 709 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 AC104819.1-201ENST00000504587 486 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AC074051.2-201ENST00000565115 352 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AP001350.2-201ENST00000625104 1094 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 AL121956.5-201ENST00000625261 221 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 PRAL-201ENST00000624952 3286 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AP005117.1-202ENST00000581724 1908 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 AL590787.1-201ENST00000568856 1315 ntBASIC12.05□□□□□ -0.48
SMIM17P0DL12 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.05□□□□□ -0.48
SMIM17P0DL12 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM17P0DL12 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AC079776.2-201ENST00000641154 1609 ntBASIC12.04□□□□□ -0.48
SMIM17P0DL12 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
SMIM17P0DL12 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM17P0DL12 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms