Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.15□□□□□ -0.14
UBCP0CG48 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBCP0CG48 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 CRYGEP-201ENST00000412192 528 ntBASIC14.15□□□□□ -0.14
UBCP0CG48 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.15□□□□□ -0.14
UBCP0CG48 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.15□□□□□ -0.14
UBCP0CG48 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 AL773604.1-201ENST00000617417 272 ntBASIC14.15□□□□□ -0.14
UBCP0CG48 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.15□□□□□ -0.14
UBCP0CG48 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
UBCP0CG48 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBCP0CG48 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
UBCP0CG48 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 AP001282.1-201ENST00000531301 1499 ntBASIC14.14□□□□□ -0.15
UBCP0CG48 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBCP0CG48 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.14□□□□□ -0.15
UBCP0CG48 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.14□□□□□ -0.15
UBCP0CG48 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 AC148477.8-201ENST00000624298 468 ntBASIC14.14□□□□□ -0.15
UBCP0CG48 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.14□□□□□ -0.15
UBCP0CG48 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBCP0CG48 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.14□□□□□ -0.15
UBCP0CG48 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 AC007326.2-201ENST00000624224 7579 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBCP0CG48 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 AC020658.6-201ENST00000623564 1870 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.13□□□□□ -0.15
UBCP0CG48 IGLL3P-201ENST00000412472 434 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 AC098831.1-202ENST00000438821 336 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.13□□□□□ -0.15
UBCP0CG48 AC093909.1-201ENST00000504731 1122 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.13□□□□□ -0.15
UBCP0CG48 UNC93B6-202ENST00000528242 690 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.13□□□□□ -0.15
UBCP0CG48 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.13□□□□□ -0.15
UBCP0CG48 AC096734.2-201ENST00000562054 433 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 MIR7706-201ENST00000613747 67 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 AC007064.4-201ENST00000637740 555 ntBASIC14.13□□□□□ -0.15
UBCP0CG48 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBCP0CG48 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
UBCP0CG48 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms