Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RETP07949 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.19■□□□□ 0.18
RETP07949 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
RETP07949 PCDHB17P-201ENST00000539533 2393 ntBASIC16.19■□□□□ 0.18
RETP07949 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RETP07949 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RETP07949 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RETP07949 MST1L-201ENST00000442552 2185 ntBASIC16.19■□□□□ 0.18
RETP07949 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.18■□□□□ 0.18
RETP07949 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RETP07949 AL513523.2-202ENST00000427283 2040 ntBASIC16.18■□□□□ 0.18
RETP07949 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RETP07949 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RETP07949 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.18■□□□□ 0.18
RETP07949 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.18■□□□□ 0.18
RETP07949 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.18■□□□□ 0.18
RETP07949 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.18■□□□□ 0.18
RETP07949 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.18■□□□□ 0.18
RETP07949 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.18■□□□□ 0.18
RETP07949 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.18■□□□□ 0.18
RETP07949 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.18■□□□□ 0.18
RETP07949 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RETP07949 AC026979.3-201ENST00000607315 403 ntBASIC16.18■□□□□ 0.18
RETP07949 AC244093.1-201ENST00000610837 814 ntBASIC16.18■□□□□ 0.18
RETP07949 MIR6069-201ENST00000620069 79 ntBASIC16.18■□□□□ 0.18
RETP07949 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.18■□□□□ 0.18
RETP07949 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RETP07949 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.18■□□□□ 0.18
RETP07949 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RETP07949 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RETP07949 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 SPDYE17-201ENST00000412399 783 ntBASIC16.17■□□□□ 0.18
RETP07949 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.17■□□□□ 0.18
RETP07949 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.17■□□□□ 0.18
RETP07949 KLF2P4-201ENST00000451959 1225 ntBASIC16.17■□□□□ 0.18
RETP07949 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RETP07949 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 AC104596.2-201ENST00000512793 793 ntBASIC16.17■□□□□ 0.18
RETP07949 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RETP07949 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RETP07949 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.17■□□□□ 0.18
RETP07949 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.17■□□□□ 0.18
RETP07949 AC010319.3-201ENST00000597028 470 ntBASIC16.17■□□□□ 0.18
RETP07949 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.17■□□□□ 0.18
RETP07949 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RETP07949 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.17■□□□□ 0.18
RETP07949 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RETP07949 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RETP07949 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RETP07949 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RETP07949 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RETP07949 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RETP07949 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.16■□□□□ 0.18
RETP07949 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms